
Molecular graphs in drug discovery are mathematical representations of molecules, where atoms are represented as nodes and bonds as edges1. These graphs provide a structured way to encode molecular structures for computational analysis, aiding in tasks such as molecular property prediction and de novo drug design. Molecular graphs can be visualized using various software, and can also encode 3D information, offering advantages over linear notations.

AI techniques, such as machine learning and deep learning, are applied in cheminformatics for tasks like molecular property prediction, drug discovery, and chemical reaction analysis. These methods enable efficient handling and analysis of large chemical datasets, accelerating the drug discovery process and improving the understanding of chemical structures and properties.

Connection tables play a crucial role in molecular representation by providing a comprehensive description of a molecule's structure. They list atoms and their connections, representing bonds as rows in a table. This information can be used to generate molecular graphs and is essential for computational analysis in drug discovery and cheminformatics. Connection tables also facilitate the storage and transfer of chemical information in a compact and systematic manner.